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Merge pull request 'some refactoring on data read/write path' (#729) from refactor-block into main

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Reviewed-on: Deuxfleurs/garage#729
This commit is contained in:
Alex 2024-02-23 15:49:43 +00:00
commit 61758ce0f9
6 changed files with 132 additions and 150 deletions
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12
src/api/s3/get.rs
View file

@ -13,7 +13,7 @@ use http::header::{
use hyper::{body::Body, Request, Response, StatusCode};
use tokio::sync::mpsc;
use garage_block::manager::BlockStream;
use garage_net::stream::ByteStream;
use garage_rpc::rpc_helper::OrderTag;
use garage_table::EmptyKey;
use garage_util::data::*;
@ -286,7 +286,7 @@ pub async fn handle_get(
Ok(resp_builder.body(bytes_body(bytes.to_vec().into()))?)
}
ObjectVersionData::FirstBlock(_, first_block_hash) => {
let (tx, rx) = mpsc::channel::<BlockStream>(2);
let (tx, rx) = mpsc::channel::<ByteStream>(2);
let order_stream = OrderTag::stream();
let first_block_hash = *first_block_hash;
@ -494,7 +494,7 @@ fn body_from_blocks_range(
}
let order_stream = OrderTag::stream();
let (tx, rx) = mpsc::channel::<BlockStream>(2);
let (tx, rx) = mpsc::channel::<ByteStream>(2);
tokio::spawn(async move {
match async {
@ -542,7 +542,7 @@ fn body_from_blocks_range(
})
.filter_map(futures::future::ready);
let block_stream: BlockStream = Box::pin(block_stream);
let block_stream: ByteStream = Box::pin(block_stream);
tx.send(Box::pin(block_stream))
.await
.ok_or_message("channel closed")?;
@ -562,7 +562,7 @@ fn body_from_blocks_range(
response_body_from_block_stream(rx)
}
fn response_body_from_block_stream(rx: mpsc::Receiver<BlockStream>) -> ResBody {
fn response_body_from_block_stream(rx: mpsc::Receiver<ByteStream>) -> ResBody {
let body_stream = tokio_stream::wrappers::ReceiverStream::new(rx)
.flatten()
.map(|x| {
@ -572,7 +572,7 @@ fn response_body_from_block_stream(rx: mpsc::Receiver<BlockStream>) -> ResBody {
ResBody::new(http_body_util::StreamBody::new(body_stream))
}
fn error_stream_item<E: std::fmt::Display>(e: E) -> BlockStream {
fn error_stream_item<E: std::fmt::Display>(e: E) -> ByteStream {
let err = std::io::Error::new(
std::io::ErrorKind::Other,
format!("Error while getting object data: {}", e),

127
src/block/block.rs
View file

@ -2,107 +2,98 @@ use std::path::PathBuf;
use bytes::Bytes;
use serde::{Deserialize, Serialize};
use zstd::stream::{decode_all as zstd_decode, Encoder};
use zstd::stream::Encoder;
use garage_util::data::*;
use garage_util::error::*;
use garage_net::stream::ByteStream;
#[derive(Debug, Serialize, Deserialize, Copy, Clone)]
pub enum DataBlockHeader {
Plain,
Compressed,
}
/// A possibly compressed block of data
pub enum DataBlock {
/// Uncompressed data
Plain(Bytes),
/// Data compressed with zstd
Compressed(Bytes),
#[derive(Debug)]
pub struct DataBlockElem<T> {
header: DataBlockHeader,
elem: T,
}
#[derive(Debug)]
pub enum DataBlockPath {
/// Uncompressed data fail
Plain(PathBuf),
/// Compressed data fail
Compressed(PathBuf),
/// A possibly compressed block of data
pub type DataBlock = DataBlockElem<Bytes>;
/// A path to a possibly compressed block of data
pub type DataBlockPath = DataBlockElem<PathBuf>;
/// A stream of possibly compressed block data
pub type DataBlockStream = DataBlockElem<ByteStream>;
impl DataBlockHeader {
pub fn is_compressed(&self) -> bool {
matches!(self, DataBlockHeader::Compressed)
}
}
impl<T> DataBlockElem<T> {
pub fn from_parts(header: DataBlockHeader, elem: T) -> Self {
Self { header, elem }
}
pub fn plain(elem: T) -> Self {
Self {
header: DataBlockHeader::Plain,
elem,
}
}
pub fn compressed(elem: T) -> Self {
Self {
header: DataBlockHeader::Compressed,
elem,
}
}
pub fn into_parts(self) -> (DataBlockHeader, T) {
(self.header, self.elem)
}
pub fn as_parts_ref(&self) -> (DataBlockHeader, &T) {
(self.header, &self.elem)
}
}
impl DataBlock {
/// Query whether this block is compressed
pub fn is_compressed(&self) -> bool {
matches!(self, DataBlock::Compressed(_))
}
/// Get the inner, possibly compressed buffer. You should probably use [`DataBlock::verify_get`]
/// instead
pub fn inner_buffer(&self) -> &[u8] {
use DataBlock::*;
let (Plain(ref res) | Compressed(ref res)) = self;
res
}
/// Get the buffer, possibly decompressing it, and verify it's integrity.
/// For Plain block, data is compared to hash, for Compressed block, zstd checksumming system
/// is used instead.
pub fn verify_get(self, hash: Hash) -> Result<Bytes, Error> {
match self {
DataBlock::Plain(data) => {
if blake2sum(&data) == hash {
Ok(data)
} else {
Err(Error::CorruptData(hash))
}
}
DataBlock::Compressed(data) => zstd_decode(&data[..])
.map_err(|_| Error::CorruptData(hash))
.map(Bytes::from),
}
}
/// Verify data integrity. Allocate less than [`DataBlock::verify_get`] and don't consume self, but
/// does not return the buffer content.
/// Verify data integrity. Does not return the buffer content.
pub fn verify(&self, hash: Hash) -> Result<(), Error> {
match self {
DataBlock::Plain(data) => {
if blake2sum(data) == hash {
match self.header {
DataBlockHeader::Plain => {
if blake2sum(&self.elem) == hash {
Ok(())
} else {
Err(Error::CorruptData(hash))
}
}
DataBlock::Compressed(data) => zstd::stream::copy_decode(&data[..], std::io::sink())
.map_err(|_| Error::CorruptData(hash)),
DataBlockHeader::Compressed => {
zstd::stream::copy_decode(&self.elem[..], std::io::sink())
.map_err(|_| Error::CorruptData(hash))
}
}
}
pub async fn from_buffer(data: Bytes, level: Option<i32>) -> DataBlock {
tokio::task::spawn_blocking(move || {
if let Some(level) = level {
if let Ok(data) = zstd_encode(&data[..], level) {
return DataBlock::Compressed(data.into());
if let Ok(data_compressed) = zstd_encode(&data[..], level) {
return DataBlock::compressed(data_compressed.into());
}
}
DataBlock::Plain(data)
DataBlock::plain(data.into())
})
.await
.unwrap()
}
pub fn into_parts(self) -> (DataBlockHeader, Bytes) {
match self {
DataBlock::Plain(data) => (DataBlockHeader::Plain, data),
DataBlock::Compressed(data) => (DataBlockHeader::Compressed, data),
}
}
pub fn from_parts(h: DataBlockHeader, bytes: Bytes) -> Self {
match h {
DataBlockHeader::Plain => DataBlock::Plain(bytes),
DataBlockHeader::Compressed => DataBlock::Compressed(bytes),
}
}
}
fn zstd_encode<R: std::io::Read>(mut source: R, level: i32) -> std::io::Result<Vec<u8>> {

119
src/block/manager.rs
View file

@ -1,5 +1,4 @@
use std::path::PathBuf;
use std::pin::Pin;
use std::sync::Arc;
use std::time::Duration;
@ -9,8 +8,6 @@ use bytes::Bytes;
use rand::prelude::*;
use serde::{Deserialize, Serialize};
use futures::Stream;
use futures_util::stream::StreamExt;
use tokio::fs;
use tokio::io::{AsyncReadExt, AsyncWriteExt, BufReader};
use tokio::sync::{mpsc, Mutex, MutexGuard};
@ -20,7 +17,7 @@ use opentelemetry::{
Context,
};
use garage_net::stream::{stream_asyncread, ByteStream};
use garage_net::stream::{read_stream_to_end, stream_asyncread, ByteStream};
use garage_db as db;
@ -53,9 +50,6 @@ pub const INLINE_THRESHOLD: usize = 3072;
// to delete the block locally.
pub(crate) const BLOCK_GC_DELAY: Duration = Duration::from_secs(600);
pub type BlockStream =
Pin<Box<dyn Stream<Item = Result<Bytes, std::io::Error>> + Send + Sync + 'static>>;
/// RPC messages used to share blocks of data between nodes
#[derive(Debug, Serialize, Deserialize)]
pub enum BlockRpc {
@ -235,10 +229,8 @@ impl BlockManager {
&self,
hash: &Hash,
order_tag: Option<OrderTag>,
) -> Result<(DataBlockHeader, ByteStream), Error> {
self.rpc_get_raw_block_internal(hash, order_tag, |header, stream| async move {
Ok((header, stream))
})
) -> Result<DataBlockStream, Error> {
self.rpc_get_raw_block_internal(hash, order_tag, |stream| async move { Ok(stream) })
.await
}
@ -249,10 +241,12 @@ impl BlockManager {
hash: &Hash,
order_tag: Option<OrderTag>,
) -> Result<DataBlock, Error> {
self.rpc_get_raw_block_internal(hash, order_tag, |header, stream| async move {
self.rpc_get_raw_block_internal(hash, order_tag, |block_stream| async move {
let (header, stream) = block_stream.into_parts();
read_stream_to_end(stream)
.await
.map(|data| DataBlock::from_parts(header, data))
.err_context("error in block data stream")
.map(|data| DataBlock::from_parts(header, data.into_bytes()))
})
.await
}
@ -264,7 +258,7 @@ impl BlockManager {
f: F,
) -> Result<T, Error>
where
F: Fn(DataBlockHeader, ByteStream) -> Fut,
F: Fn(DataBlockStream) -> Fut,
Fut: futures::Future<Output = Result<T, Error>>,
{
let who = self.replication.read_nodes(hash);
@ -286,8 +280,8 @@ impl BlockManager {
continue;
}
};
let (header, stream) = match res.into_parts() {
(Ok(BlockRpc::PutBlock { hash: _, header }), Some(stream)) => (header, stream),
let block_stream = match res.into_parts() {
(Ok(BlockRpc::PutBlock { hash: _, header }), Some(stream)) => DataBlockStream::from_parts(header, stream),
(Ok(_), _) => {
debug!("Get block {:?}: node {:?} returned a malformed response", hash, node);
continue;
@ -297,7 +291,7 @@ impl BlockManager {
continue;
}
};
match f(header, stream).await {
match f(block_stream).await {
Ok(ret) => return Ok(ret),
Err(e) => {
debug!("Get block {:?}: error reading stream from node {:?}: {}", hash, node, e);
@ -321,14 +315,14 @@ impl BlockManager {
// ---- Public interface ----
/// Ask nodes that might have a block for it,
/// return it as a stream
/// Ask nodes that might have a block for it, return it as a stream
pub async fn rpc_get_block_streaming(
&self,
hash: &Hash,
order_tag: Option<OrderTag>,
) -> Result<BlockStream, Error> {
let (header, stream) = self.rpc_get_raw_block_streaming(hash, order_tag).await?;
) -> Result<ByteStream, Error> {
let block_stream = self.rpc_get_raw_block_streaming(hash, order_tag).await?;
let (header, stream) = block_stream.into_parts();
match header {
DataBlockHeader::Plain => Ok(stream),
DataBlockHeader::Compressed => {
@ -341,15 +335,14 @@ impl BlockManager {
}
}
/// Ask nodes that might have a block for it
/// Ask nodes that might have a block for it, return it as one big Bytes
pub async fn rpc_get_block(
&self,
hash: &Hash,
order_tag: Option<OrderTag>,
) -> Result<Bytes, Error> {
self.rpc_get_raw_block(hash, order_tag)
.await?
.verify_get(*hash)
let stream = self.rpc_get_block_streaming(hash, order_tag).await?;
Ok(read_stream_to_end(stream).await?.into_bytes())
}
/// Send block to nodes that should have it
@ -482,7 +475,7 @@ impl BlockManager {
stream: Option<ByteStream>,
) -> Result<(), Error> {
let stream = stream.ok_or_message("missing stream")?;
let bytes = read_stream_to_end(stream).await?;
let bytes = read_stream_to_end(stream).await?.into_bytes();
let data = DataBlock::from_parts(header, bytes);
self.write_block(&hash, &data).await
}
@ -553,10 +546,7 @@ impl BlockManager {
hash: &Hash,
block_path: &DataBlockPath,
) -> Result<DataBlock, Error> {
let (path, compressed) = match block_path {
DataBlockPath::Plain(p) => (p, false),
DataBlockPath::Compressed(p) => (p, true),
};
let (header, path) = block_path.as_parts_ref();
let mut f = fs::File::open(&path).await?;
let mut data = vec![];
@ -564,11 +554,7 @@ impl BlockManager {
self.metrics.bytes_read.add(data.len() as u64);
drop(f);
let data = if compressed {
DataBlock::Compressed(data.into())
} else {
DataBlock::Plain(data.into())
};
let data = DataBlock::from_parts(header, data.into());
if data.verify(*hash).is_err() {
self.metrics.corruption_counter.add(1);
@ -621,20 +607,20 @@ impl BlockManager {
// first and then a compressed one (as compression may have been
// previously enabled).
if fs::metadata(&path).await.is_ok() {
return Some(DataBlockPath::Plain(path));
return Some(DataBlockPath::plain(path));
}
path.set_extension("zst");
if fs::metadata(&path).await.is_ok() {
return Some(DataBlockPath::Compressed(path));
return Some(DataBlockPath::compressed(path));
}
} else {
path.set_extension("zst");
if fs::metadata(&path).await.is_ok() {
return Some(DataBlockPath::Compressed(path));
return Some(DataBlockPath::compressed(path));
}
path.set_extension("");
if fs::metadata(&path).await.is_ok() {
return Some(DataBlockPath::Plain(path));
return Some(DataBlockPath::plain(path));
}
}
}
@ -704,8 +690,8 @@ impl BlockManagerLocked {
mgr: &BlockManager,
existing_path: Option<DataBlockPath>,
) -> Result<(), Error> {
let compressed = data.is_compressed();
let data = data.inner_buffer();
let (header, data) = data.as_parts_ref();
let compressed = header.is_compressed();
let directory = mgr.data_layout.load().primary_block_dir(hash);
@ -715,24 +701,25 @@ impl BlockManagerLocked {
tgt_path.set_extension("zst");
}
let to_delete = match (existing_path, compressed) {
let existing_info = existing_path.map(|x| x.into_parts());
let to_delete = match (existing_info, compressed) {
// If the block is stored in the wrong directory,
// write it again at the correct path and delete the old path
(Some(DataBlockPath::Plain(p)), false) if p != tgt_path => Some(p),
(Some(DataBlockPath::Compressed(p)), true) if p != tgt_path => Some(p),
(Some((DataBlockHeader::Plain, p)), false) if p != tgt_path => Some(p),
(Some((DataBlockHeader::Compressed, p)), true) if p != tgt_path => Some(p),
// If the block is already stored not compressed but we have a compressed
// copy, write the compressed copy and delete the uncompressed one
(Some(DataBlockPath::Plain(plain_path)), true) => Some(plain_path),
(Some((DataBlockHeader::Plain, plain_path)), true) => Some(plain_path),
// If the block is already stored compressed,
// keep the stored copy, we have nothing to do
(Some(DataBlockPath::Compressed(_)), _) => return Ok(()),
(Some((DataBlockHeader::Compressed, _)), _) => return Ok(()),
// If the block is already stored not compressed,
// and we don't have a compressed copy either,
// keep the stored copy, we have nothing to do
(Some(DataBlockPath::Plain(_)), false) => return Ok(()),
(Some((DataBlockHeader::Plain, _)), false) => return Ok(()),
// If the block isn't stored already, just store what is given to us
(None, _) => None,
@ -784,18 +771,14 @@ impl BlockManagerLocked {
}
async fn move_block_to_corrupted(&self, block_path: &DataBlockPath) -> Result<(), Error> {
let (path, path2) = match block_path {
DataBlockPath::Plain(p) => {
let mut p2 = p.clone();
p2.set_extension("corrupted");
(p, p2)
let (header, path) = block_path.as_parts_ref();
let mut path2 = path.clone();
if header.is_compressed() {
path2.set_extension("zst.corrupted");
} else {
path2.set_extension("corrupted");
}
DataBlockPath::Compressed(p) => {
let mut p2 = p.clone();
p2.set_extension("zst.corrupted");
(p, p2)
}
};
fs::rename(path, path2).await?;
Ok(())
@ -805,9 +788,7 @@ impl BlockManagerLocked {
let rc = mgr.rc.get_block_rc(hash)?;
if rc.is_deletable() {
while let Some(path) = mgr.find_block(hash).await {
let path = match path {
DataBlockPath::Plain(p) | DataBlockPath::Compressed(p) => p,
};
let (_header, path) = path.as_parts_ref();
fs::remove_file(path).await?;
mgr.metrics.delete_counter.add(1);
}
@ -824,24 +805,10 @@ impl BlockManagerLocked {
let data = mgr.read_block_from(hash, &wrong_path).await?;
self.write_block_inner(hash, &data, mgr, Some(wrong_path))
.await?;
Ok(data.inner_buffer().len())
Ok(data.as_parts_ref().1.len())
}
}
async fn read_stream_to_end(mut stream: ByteStream) -> Result<Bytes, Error> {
let mut parts: Vec<Bytes> = vec![];
while let Some(part) = stream.next().await {
parts.push(part.ok_or_message("error in stream")?);
}
Ok(parts
.iter()
.map(|x| &x[..])
.collect::<Vec<_>>()
.concat()
.into())
}
struct DeleteOnDrop(Option<PathBuf>);
impl DeleteOnDrop {

4
src/block/repair.rs
View file

@ -584,8 +584,8 @@ impl Worker for RebalanceWorker {
let prim_loc = self.manager.data_layout.load().primary_block_dir(&hash);
if path.ancestors().all(|x| x != prim_loc) {
let block_path = match path.extension() {
None => DataBlockPath::Plain(path.clone()),
Some(x) if x.to_str() == Some("zst") => DataBlockPath::Compressed(path.clone()),
None => DataBlockPath::plain(path.clone()),
Some(x) if x.to_str() == Some("zst") => DataBlockPath::compressed(path.clone()),
_ => {
warn!("not rebalancing file: {}", path.to_string_lossy());
return Ok(WorkerState::Busy);

13
src/net/bytes_buf.rs
View file

@ -3,6 +3,8 @@ use std::collections::VecDeque;
use bytes::BytesMut;
use crate::stream::ByteStream;
pub use bytes::Bytes;
/// A circular buffer of bytes, internally represented as a list of Bytes
@ -119,6 +121,17 @@ impl BytesBuf {
pub fn into_slices(self) -> VecDeque<Bytes> {
self.buf
}
/// Return the entire buffer concatenated into a single big Bytes
pub fn into_bytes(mut self) -> Bytes {
self.take_all()
}
/// Return the content as a stream of individual chunks
pub fn into_stream(self) -> ByteStream {
use futures::stream::StreamExt;
Box::pin(futures::stream::iter(self.buf).map(|x| Ok(x)))
}
}
impl Default for BytesBuf {

11
src/net/stream.rs
View file

@ -200,3 +200,14 @@ pub fn asyncread_stream<R: AsyncRead + Send + Sync + 'static>(reader: R) -> Byte
pub fn stream_asyncread(stream: ByteStream) -> impl AsyncRead + Send + Sync + 'static {
tokio_util::io::StreamReader::new(stream)
}
/// Reads all of the content of a `ByteStream` into a BytesBuf
/// that contains everything
pub async fn read_stream_to_end(mut stream: ByteStream) -> Result<BytesBuf, std::io::Error> {
let mut buf = BytesBuf::new();
while let Some(part) = stream.next().await {
buf.extend(part?);
}
Ok(buf)
}